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Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer.
Cotto KC, Feng YY, Ramu A, Richters M, Freshour SL, Skidmore ZL, Xia H, McMichael JF, Kunisaki J, Campbell KM, Chen TH, Rozycki EB, Adkins D, Devarakonda S, Sankararaman S, Lin Y, Chapman WC, Maher CA, Arora V, Dunn GP, Uppaluri R, Govindan R, Griffith OL, Griffith M. Cotto KC, et al. Among authors: rozycki eb. Nat Commun. 2023 Mar 22;14(1):1589. doi: 10.1038/s41467-023-37266-6. Nat Commun. 2023. PMID: 36949070 Free PMC article.
Pan-Cancer Analysis Reveals Recurrent BCAR4 Gene Fusions across Solid Tumors.
Nickless A, Zhang J, Othoum G, Webster J, Inkman MJ, Coonrod E, Fontes S, Rozycki EB, Maher CA, White NM. Nickless A, et al. Among authors: rozycki eb. Mol Cancer Res. 2022 Oct 4;20(10):1481-1488. doi: 10.1158/1541-7786.MCR-21-0775. Mol Cancer Res. 2022. PMID: 35852383 Free PMC article.
DANSR: A Tool for the Detection of Annotated and Novel Small RNAs.
Zhang J, Eteleeb AM, Rozycki EB, Inkman MJ, Ly A, Scharf RE, Jayachandran K, Krasnick BA, Mazur T, White NM, Fields RC, Maher CA. Zhang J, et al. Among authors: rozycki eb. Noncoding RNA. 2022 Jan 13;8(1):9. doi: 10.3390/ncrna8010009. Noncoding RNA. 2022. PMID: 35076605 Free PMC article.
Long non-coding RNA RAMS11 promotes metastatic colorectal cancer progression.
Silva-Fisher JM, Dang HX, White NM, Strand MS, Krasnick BA, Rozycki EB, Jeffers GGL, Grossman JG, Highkin MK, Tang C, Cabanski CR, Eteleeb A, Mudd J, Goedegebuure SP, Luo J, Mardis ER, Wilson RK, Ley TJ, Lockhart AC, Fields RC, Maher CA. Silva-Fisher JM, et al. Among authors: rozycki eb. Nat Commun. 2020 May 1;11(1):2156. doi: 10.1038/s41467-020-15547-8. Nat Commun. 2020. PMID: 32358485 Free PMC article.
LINC00355 regulates p27KIP expression by binding to MENIN to induce proliferation in late-stage relapse breast cancer.
Eteleeb AM, Thunuguntla PK, Gelev KZ, Tang CY, Rozycki EB, Miller A, Lei JT, Jayasinghe RG, Dang HX, White NM, Reis-Filho JS, Mardis ER, Ellis MJ, Ding L, Silva-Fisher JM, Maher CA. Eteleeb AM, et al. Among authors: rozycki eb. NPJ Breast Cancer. 2022 Apr 13;8(1):49. doi: 10.1038/s41523-022-00412-2. NPJ Breast Cancer. 2022. PMID: 35418131 Free PMC article.